blob: 4ba1a5e8fd81608e22c5b511f6677c995e515256 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=philr
_pkgver=1.30.0
pkgname=r-${_pkgname,,}
pkgver=1.30.0
pkgrel=1
pkgdesc='Phylogenetic partitioning based ILR transform for metagenomics data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-ape
r-ggplot2
r-ggtree
r-phangorn
r-tidyr
)
optdepends=(
r-biocstyle
r-dplyr
r-ecodist
r-glmnet
r-knitr
r-mia
r-phyloseq
r-rmarkdown
r-summarizedexperiment
r-testthat
r-treesummarizedexperiment
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('b0408a557cb0e99581c5ec2063f8c39551df4bc3898e20bf421aef7cf3c1d4c8')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|