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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=Pigengene
_pkgver=1.28.0
pkgname=r-${_pkgname,,}
pkgver=1.28.0
pkgrel=1
pkgdesc='Infers biological signatures from gene expression data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biocstyle
r-bnlearn
r-c50
r-clusterprofiler
r-dbi
r-dose
r-dplyr
r-gdata
r-ggplot2
r-go.db
r-graph
r-impute
r-matrixstats
r-openxlsx
r-partykit
r-pheatmap
r-preprocesscore
r-reactomepa
r-rgraphviz
r-wgcna
)
optdepends=(
r-annotationdbi
r-biomart
r-energy
r-knitr
r-org.hs.eg.db
r-org.mm.eg.db
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('7375a0be2eb648a6442ecbc6f29795c6fbce303402c0dd2e6c8f79d2b1c1096a')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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