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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=protGear
_pkgver=1.10.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Protein Micro Array Data Management and Interactive Visualization"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-only')
depends=(
r-biobase
r-data.table
r-dplyr
r-factoextra
r-factominer
r-flexdashboard
r-genefilter
r-ggally
r-ggplot2
r-ggpubr
r-gtools
r-htmltools
r-kendall
r-knitr
r-limma
r-magrittr
r-pheatmap
r-plotly
r-plyr
r-purrr
r-readr
r-remotes
r-rlang
r-rmarkdown
r-shiny
r-shinydashboard
r-styler
r-tibble
r-tidyr
r-vsn
)
optdepends=(
r-ggplotify
r-gridextra
r-magick
r-png
r-scales
r-shinyalert
r-shinycssloaders
r-shinyfeedback
r-shinyfiles
r-shinyjs
r-shinythemes
r-shinywidgets
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('0a2cf4e8e146f432a0ac89e6a6dc2f24')
b2sums=('ae0e42747b20585530265854c22144b33bcfffd8b888f826e657ec2677c8134fc93d4da1d2133161b8ca1cf863228275c3918d867071faec90ab2dda42b7b7b1')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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