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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=Rarr
_pkgver=1.4.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Read Zarr Files in R"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('MIT')
depends=(
blosc
r-httr
r-jsonlite
r-paws.storage
r-r.utils
r-stringr
zstd
)
checkdepends=(
r-mockery
r-tinytest
)
optdepends=(
r-biocstyle
r-covr
r-knitr
r-mockery
r-tinytest
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('b4ccf32bada187fdbb1ce37b6c49b23f')
b2sums=('1b13a23377f723ea5d33e2b832edf10b79c92b1a6eca513859b3307b334b5a686bfc64a409a43dececda5840e093facd105b8582310a3c160f87954eccf57112')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
check() {
cd "$_pkgname/tests"
R_LIBS="$srcdir/build" Rscript --vanilla tinytest.R
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
install -d "$pkgdir/usr/share/licenses/$pkgname"
ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
}
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