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# system requirements: nodejs
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=RcwlPipelines
_pkgver=1.22.0
pkgname=r-${_pkgname,,}
pkgver=1.22.0
pkgrel=1
pkgdesc='Bioinformatics pipelines based on Rcwl'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biocfilecache
r-git2r
r-httr
r-rappdirs
r-rcwl
r-s4vectors
nodejs
)
optdepends=(
r-biocstyle
r-knitr
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('af02a5b3750162f8d82d61a3ca004d6cbe623fd1f7a702834d14a6cf4cb039d1')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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