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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=regioneR
_pkgver=1.34.0
pkgname=r-${_pkgname,,}
pkgver=1.34.0
pkgrel=1
pkgdesc='Association analysis of genomic regions based on permutation tests'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
r
r-biostrings
r-bsgenome
r-genomeinfodb
r-genomicranges
r-iranges
r-memoise
r-rtracklayer
r-s4vectors
)
optdepends=(
r-biocstyle
r-bsgenome.hsapiens.ucsc.hg19.masked
r-knitr
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('32fa22d1ef19db168a017578178a61b38c4e82b4572595eed0cf3ad18e5c8fe1')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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