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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=Rgin
_pkgver=1.15.0
pkgname=r-${_pkgname,,}
pkgver=1.15.0
pkgrel=6
pkgdesc='gin in R'
arch=('x86_64')
url="https://bioconductor.org/packages/3.15/${_pkgname}"
license=('MIT')
depends=(
r
r-rcppeigen
)
optdepends=(
r-knitr
r-rmarkdown
)
source=("https://bioconductor.org/packages/3.15/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('6ae18bf9e748671366ad65c3de03552da49db4cff6ba08601759ef5c9a90bff4')
prepare() {
sed -i 's#PKG_CXXFLAGS = #PKG_CXXFLAGS = -I/usr/lib/R/library/Rcpp/include #' "${_pkgname}/src/Makevars"
tar cfz "${_pkgname}.tar.gz" "${_pkgname}"
}
build() {
#R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
R CMD INSTALL ${_pkgname}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
# delete unneeded object files
find "${pkgdir}/usr/lib/R/library/${_pkgname}" -type f -name "*.o" -delete
}
# vim:set ts=2 sw=2 et:
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