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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=rifi
_pkgver=1.8.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="'rifi' analyses data from rifampicin time series created by microarray or RNAseq"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-only')
depends=(
r-car
r-cowplot
r-domc
r-dplyr
r-egg
r-foreach
r-ggplot2
r-nls2
r-reshape2
r-rlang
r-rtracklayer
r-s4vectors
r-scales
r-stringr
r-summarizedexperiment
r-tibble
)
optdepends=(
r-biocstyle
r-desctools
r-devtools
r-knitr
r-rmarkdown
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('ca63902fc1f80205f1c717d77688fec7')
b2sums=('1d5e843ab7adb9f5b188727d9e4d6dfc722452a2455d9dc2c89d941544cfce0b1d246f0433c5eb1cd80790c2deb8a00843bd430334c21ffc6caeffe607fc7ee9')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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