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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=RITAN
_pkgver=1.28.0
pkgname=r-${_pkgname,,}
pkgver=1.28.0
pkgrel=1
pkgdesc='Rapid Integration of Term Annotation and Network resources'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('custom')
depends=(
r
r-bgeedb
r-dynamictreecut
r-ggplot2
r-gplots
r-gridextra
r-gsubfn
r-hash
r-igraph
r-knitr
r-linkcomm
r-mcl
r-plotrix
r-png
r-rcolorbrewer
r-reshape2
r-ritandata
r-sqldf
r-stringdb
r-genomicfeatures
r-ensembldb
r-annotationfilter
r-ensdb.hsapiens.v86
)
optdepends=(
r-bgeedb
r-rmarkdown
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('f453bbc24aa3dfc1e13cd55e40176e5a59f2600cac8a891c6396f687dbdb7ccb')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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