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# system requirements: Rcpp
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=RJMCMCNucleosomes
_pkgver=1.28.0
pkgname=r-${_pkgname,,}
pkgver=1.28.0
pkgrel=1
pkgdesc='Bayesian hierarchical model for genome-wide nucleosome positioning with high-throughput short-read data (MNase-Seq)'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
r
r-biocgenerics
r-biocparallel
r-consensusseeker
r-genomeinfodb
r-genomicranges
r-iranges
r-rcpp
r-s4vectors
gsl
)
optdepends=(
r-biocstyle
r-knitr
r-nucleosim
r-rmarkdown
r-runit
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('53bb31eee1a4b8d9fc51a91aa41c352edb5533e21699986e436c3cd37e302d71')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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