blob: c7a4b39108bfd6a19a9772acaaba030b23cbf7b5 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=Rnits
_pkgver=1.38.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="R Normalization and Inference of Time Series data"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-only')
depends=(
r-affy
r-biobase
r-ggplot2
r-impute
r-limma
r-qvalue
r-reshape2
)
optdepends=(
r-biocstyle
r-geoquery
r-knitr
r-stringr
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('bfa005075ef67b1f6e984d42d0059e7c')
b2sums=('6d3d69d1e39d7c45b8f8f6956b18bb01c39e6f7b031a89c64e2e0bedac943bc1b05722312ab724ce0f297e5764a27023682d4ff00d3ae82c676ab75dba3c5ad1')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
|