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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=Rnits
_pkgver=1.44.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="R Normalization and Inference of Time Series data"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-only')
depends=(
  r-affy
  r-biobase
  r-ggplot2
  r-impute
  r-limma
  r-qvalue
  r-reshape2
)
optdepends=(
  r-biocstyle
  r-geoquery
  r-knitr
  r-stringr
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('68acbbfc0210ee45f9a1a181b0e3c983')
b2sums=('a17a2a588910fc1c5f4a75ca9081b5779112ead1e5a60bda50f89cb15df292150c3314d0cc9a7046f8abd168d915fec9af7fb28245a3fd7deaface9be6297160')

build() {
  mkdir build
  R CMD INSTALL -l build "$_pkgname"
}

package() {
  install -d "$pkgdir/usr/lib/R/library"
  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}