blob: 1952c9ea303480f54c55fe28293538bc0a2821f8 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=RSVSim
_pkgver=1.52.0
pkgname=r-${_pkgname,,}
pkgver=1.52.0
pkgrel=1
pkgdesc='RSVSim: an R/Bioconductor package for the simulation of structural variations'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('LGPL')
depends=(
r
r-biostrings
r-genomicranges
r-iranges
r-shortread
)
optdepends=(
r-bsgenome.hsapiens.ucsc.hg19
r-bsgenome.hsapiens.ucsc.hg19.masked
r-mass
r-rtracklayer
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('7d44a47bb4643e60ce8c28ef5c6ec49f10ab63cdc7b957a0acd9187929f98773')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|