blob: d491f5ba0b707a7b3d4ecf97a58f66cb1997b8e4 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=scanMiR
_pkgver=1.12.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="scanMiR"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-only')
depends=(
r-biocparallel
r-biostrings
r-cowplot
r-data.table
r-genomeinfodb
r-genomicranges
r-ggplot2
r-iranges
r-pwalign
r-s4vectors
r-seqlogo
r-stringi
)
optdepends=(
r-biocstyle
r-knitr
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('0462c08dd1520af82e09351a0605a521')
b2sums=('cc3a623744d26337a2a81acbc9b3f395ed1d8b3008e6c18debfa004a644583ce6f05bd2880af536b6fb368723ccc87357d974ec003e2afb6d6ede551a52f477a')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
|