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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=SCArray
_pkgver=1.12.0
pkgname=r-${_pkgname,,}
pkgver=1.12.0
pkgrel=1
pkgdesc='Large-scale single-cell RNA-seq data manipulation with GDS files'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biocparallel
r-biocsingular
r-delayedarray
r-delayedmatrixstats
r-gdsfmt
r-s4vectors
r-singlecellexperiment
r-summarizedexperiment
)
optdepends=(
r-biocgenerics
r-hdf5array
r-knitr
r-markdown
r-rhdf5
r-rmarkdown
r-runit
r-scater
r-scuttle
r-uwot
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('cb2efcd6e8c58ab4b02071769808c3aa806275545f2f26dc7cca61f8d520a3a8')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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