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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=scater
_pkgver=1.30.1
pkgname=r-${_pkgname,,}
pkgver=1.30.1
pkgrel=1
pkgdesc='Single-Cell Analysis Toolkit for Gene Expression Data in R'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-beachmat
r-biocgenerics
r-biocneighbors
r-biocparallel
r-biocsingular
r-delayedarray
r-ggbeeswarm
r-ggplot2
r-ggrastr
r-ggrepel
r-matrixgenerics
r-pheatmap
r-rcolorbrewer
r-rcppml
r-rlang
r-rtsne
r-s4vectors
r-scuttle
r-singlecellexperiment
r-summarizedexperiment
r-uwot
r-viridis
)
optdepends=(
r-biobase
r-biocstyle
r-biomart
r-cowplot
r-densvis
r-knitr
r-rmarkdown
r-robustbase
r-scattermore
r-scrnaseq
r-snifter
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('9db9bcb20f00f07de2d8b31af85a07302f4778002447036a1924d6a77bb74419')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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