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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=sccore
_pkgver=1.0.5
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Core Utilities for Single-Cell RNA-Seq"
arch=(x86_64)
url="https://cran.r-project.org/package=$_pkgname"
license=('GPL-3.0-only')
depends=(
r-dplyr
r-ggplot2
r-ggrepel
r-igraph
r-irlba
r-magrittr
r-pbmcapply
r-proc
r-rcpp
r-rlang
r-scales
r-tibble
r-uwot
r-withr
)
makedepends=(
r-rcpparmadillo
r-rcppeigen
r-rcppprogress
)
optdepends=(
r-ggrastr
r-jsonlite
r-rmumps
r-testthat
)
source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('9aed0f3a67614c35ee12a50c0b5acbaf')
b2sums=('903adac8e47187ea941f30c98c8e2cde539210179352ba540a9c3bbeb7dab68de1c637511522d07219d1c3a94bee98f0607d188102546de127d87581ae9001bc')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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