blob: f12b3ff63327216759dcba9215feddd54584d8af (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=scDblFinder
_pkgver=1.18.0
pkgname=r-${_pkgname,,}
pkgver=1.18.0
pkgrel=1
pkgdesc='scDblFinder'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biocgenerics
r-biocneighbors
r-biocparallel
r-biocsingular
r-bluster
r-delayedarray
r-genomeinfodb
r-genomicranges
r-igraph
r-iranges
r-rsamtools
r-rtracklayer
r-s4vectors
r-scater
r-scran
r-scuttle
r-singlecellexperiment
r-summarizedexperiment
r-xgboost
)
optdepends=(
r-biocstyle
r-circlize
r-complexheatmap
r-dplyr
r-ggplot2
r-knitr
r-mbkmeans
r-rmarkdown
r-scrnaseq
r-testthat
r-viridislite
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('802774ce4480105ed3137e27d848f05bf1bc30b62072109171f1f52e6156e3da')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|