PKGBUILD


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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=scHOT
_pkgver=1.18.0
pkgname=r-${_pkgname,,}
pkgver=1.18.0
pkgrel=1
pkgdesc='single-cell higher order testing'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
  r
  r-biocparallel
  r-ggforce
  r-ggplot2
  r-igraph
  r-iranges
  r-reshape
  r-s4vectors
  r-singlecellexperiment
  r-summarizedexperiment
)
optdepends=(
  r-deldir
  r-knitr
  r-markdown
  r-matrixstats
  r-rmarkdown
  r-scales
  r-scater
  r-scattermore
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('ee5d703db3ff29f3e1186b978ff2b0937e867e456a77f02fbe44edf4ba70090f')

build() {
  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}

package() {
  install -dm0755 "${pkgdir}/usr/lib/R/library"
  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et: