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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=scMerge
_pkgver=1.20.0
pkgname=r-${_pkgname,,}
pkgver=1.20.0
pkgrel=1
pkgdesc='scMerge: Merging multiple batches of scRNA-seq data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-batchelor
r-biocneighbors
r-biocparallel
r-biocsingular
r-cvtools
r-delayedarray
r-delayedmatrixstats
r-distr
r-igraph
r-m3drop
r-proxyc
r-ruv
r-s4vectors
r-scater
r-scran
r-singlecellexperiment
r-summarizedexperiment
)
optdepends=(
r-badger
r-biocstyle
r-covr
r-hdf5array
r-knitr
r-matrix
r-proxy
r-rmarkdown
r-scales
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('84ffc40a23965dd3d7bfe79ff8e4605a88a4b44947a430d6e880c3938522646c')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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