summarylogtreecommitdiffstats
path: root/PKGBUILD
blob: b5447f6975ea74d83ffe2921eea27d7bc599188f (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=SDAMS
_pkgver=1.26.0
pkgname=r-${_pkgname,,}
pkgver=1.26.0
pkgrel=1
pkgdesc='Differential Abundant/Expression Analysis for Metabolomics, Proteomics and single-cell RNA sequencing Data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
  r
  r-qvalue
  r-summarizedexperiment
  r-trust
)
optdepends=(
  r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('3773481ec2b2cb73d88ce71f704340d7240c6d713013b810013a6cba39235813')

build() {
  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}

package() {
  install -dm0755 "${pkgdir}/usr/lib/R/library"
  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et: