blob: c4ac2a9c22e87547a32ec9ee9b847134c327fdd4 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=SeqGSEA
_pkgver=1.44.0
pkgname=r-${_pkgname,,}
pkgver=1.44.0
pkgrel=1
pkgdesc='Gene Set Enrichment Analysis (GSEA) of RNA-Seq Data: integrating differential expression and splicing'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biobase
r-biomart
r-deseq2
r-doparallel
)
optdepends=(
r-genomicranges
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('9e05d04bc700963cb251f4201af20c68de594a95b6a047aec530217163a1b95b')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|