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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=sesame
_pkgver=1.20.0
pkgname=r-${_pkgname,,}
pkgver=1.20.0
pkgrel=1
pkgdesc='SEnsible Step-wise Analysis of DNA MEthylation BeadChips'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-biocfilecache
r-biocparallel
r-dplyr
r-genomeinfodb
r-genomicranges
r-ggplot2
r-illuminaio
r-iranges
r-preprocesscore
r-readr
r-reshape2
r-s4vectors
r-sesamedata
r-stringr
r-summarizedexperiment
r-tibble
r-wheatmap
)
optdepends=(
r-biocmanager
r-biocstyle
r-dnacopy
r-e1071
r-ggrepel
r-grdevices
r-kernsmooth
r-knitr
r-pals
r-randomforest
r-rmarkdown
r-rpmm
r-scales
r-testthat
r-tidyr
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('b96ef69f13c55590d950ae1d2feb05ba478ed96595b782f39410df2175ae047a')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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