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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
# Contributor: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=SeuratObject
_pkgver=5.1.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Data Structures for Single Cell Data"
arch=(x86_64)
url="https://cran.r-project.org/package=$_pkgname"
license=('MIT')
depends=(
r-future
r-future.apply
r-generics
r-lifecycle
r-progressr
r-rcpp
r-rlang
r-sp
r-spam
)
makedepends=(
r-rcppeigen
)
optdepends=(
r-bpcells
r-delayedarray
r-fs
r-ggplot2
r-hdf5array
r-rmarkdown
r-sf
r-testthat
)
source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('bc9ec0d93e73d0ed64f5e07554c41227')
b2sums=('3efd3bc4805769c539535d0bc02b7b4e5eae8059dab43f5e002f414333dcaba7d047054f34d363248e82a5ccc11afcaf9f6dc1725a74d56eec899688ed2b566a')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
install -d "$pkgdir/usr/share/licenses/$pkgname"
ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
}
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