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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
# Contributor: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=SeuratObject
_pkgver=5.0.2
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Data Structures for Single Cell Data"
arch=(x86_64)
url="https://cran.r-project.org/package=$_pkgname"
license=('MIT')
depends=(
r-future
r-future.apply
r-generics
r-lifecycle
r-progressr
r-rcpp
r-rlang
r-sp
r-spam
)
makedepends=(
r-rcppeigen
)
optdepends=(
r-bpcells
r-delayedarray
r-fs
r-ggplot2
r-hdf5array
r-rmarkdown
r-sf
r-testthat
)
source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('02b308617e1f85ed1bc2ea36a3d6a946')
b2sums=('5ca968aafb3e7dc0a5f21d1ce6bcf2858a61977f961f499d15aec5bf8af6887d0f7b3a199d4b8d8b85e9f48389a28fcd7b9067f8b5506d1c96c45b1daa316c05')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
install -d "$pkgdir/usr/share/licenses/$pkgname"
ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
}
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