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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=SIAMCAT
_pkgver=2.8.0
pkgname=r-${_pkgname,,}
pkgver=2.8.0
pkgrel=1
pkgdesc='Statistical Inference of Associations between Microbial Communities And host phenoTypes'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-beanplot
r-corrplot
r-glmnet
r-gridbase
r-gridextra
r-infotheo
r-lgr
r-liblinear
r-lmertest
r-matrixstats
r-mlr3
r-mlr3learners
r-mlr3tuning
r-paradox
r-phyloseq
r-proc
r-progress
r-prroc
r-rcolorbrewer
r-scales
r-stringr
)
optdepends=(
r-biocstyle
r-ggpubr
r-knitr
r-rmarkdown
r-testthat
r-tidyverse
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('50039caa0a7691e07ae948bf66903f90482a5be805fd2fc545d93c57d2e08902')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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