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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=simplifyEnrichment
_pkgver=1.12.0
pkgname=r-${_pkgname,,}
pkgver=1.12.0
pkgrel=1
pkgdesc='Simplify Functional Enrichment Results'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-annotationdbi
r-biocgenerics
r-circlize
r-clue
r-colorspace
r-complexheatmap
r-digest
r-getoptlong
r-globaloptions
r-go.db
r-gosemsim
r-org.hs.eg.db
r-proxyc
r-slam
r-tm
)
optdepends=(
r-apcluster
r-biocmanager
r-clusterprofiler
r-cola
r-cowplot
r-dbscan
r-do.db
r-dose
r-dynamictreecut
r-flexclust
r-fpc
r-genefilter
r-ggplot2
r-gridextra
r-gridgraphics
r-gridtext
r-hu6800.db
r-igraph
r-interactivecomplexheatmap
r-knitr
r-mcl
r-mclust
r-msigdbr
r-reactome.db
r-rmarkdown
r-shiny
r-shinydashboard
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('fc86227bb20671fbb242983e9a6b1c9509b70003817860c116b106841ca41962')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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