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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=SingleMoleculeFootprinting
_pkgver=2.0.0
pkgname=r-${_pkgname,,}
pkgver=2.0.0
pkgrel=1
pkgdesc='Analysis tools for Single Molecule Footprinting (SMF) data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biocgenerics
r-biostrings
r-bsgenome
r-data.table
r-genomeinfodb
r-genomicranges
r-iranges
r-plyr
r-quasr
r-rcolorbrewer
r-ggpointdensity
r-ggplot2
r-ggrepel
r-patchwork
r-plyranges
r-tidyverse
r-viridis
)
optdepends=(
r-bsgenome.mmusculus.ucsc.mm10
r-devtools
r-experimenthub
r-knitr
r-parallel
r-readr
r-rmarkdown
r-singlemoleculefootprintingdata
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('91be0d6bc586bd64745b6ccf2bf318cd20e88490a0b1ee34093ba5b64e63e6fd')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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