blob: 3d72540705d0e7116e10a48e888a3e556c6d3cd4 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=slalom
_pkgver=1.26.0
pkgname=r-${_pkgname,,}
pkgver=1.26.0
pkgrel=1
pkgdesc='Factorial Latent Variable Modeling of Single-Cell RNA-Seq Data'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-bh
r-ggplot2
r-gseabase
r-rcpp
r-rcpparmadillo
r-rsvd
r-singlecellexperiment
r-summarizedexperiment
)
optdepends=(
r-biocstyle
r-knitr
r-rhdf5
r-rmarkdown
r-scater
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('3db54699d3e453fd2261393ead665ff7bf684f35d90ef03f0aefccb3b030a04e')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|