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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=slinky
_pkgver=1.12.0
pkgname=r-${_pkgname,,}
pkgver=1.12.0
pkgrel=5
pkgdesc='Putting the fun in LINCS L1000 data analysis'
arch=('any')
url="https://bioconductor.org/packages/3.14/bioc/html/slinky.html"
license=('MIT')
depends=(
r
r-curl
r-dplyr
r-foreach
r-httr
r-jsonlite
r-readr
r-rhdf5
r-summarizedexperiment
r-tidyr
)
optdepends=(
r-biobase
r-biocstyle
r-doparallel
r-geode
r-ggplot2
r-knitr
r-rmarkdown
r-rtsne
r-testthat
)
source=("https://bioconductor.org/packages/3.14/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('7b6c1d58e4655744e2ba5f8422c4b2c95f184cd3e1c3a5e0fa568eef77f3dc17')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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