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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=soGGi
_pkgver=1.36.0
pkgname=r-${_pkgname,,}
pkgver=1.36.0
pkgrel=1
pkgdesc='Visualise ChIP-seq, MNase-seq and motif occurrence as aggregate plots Summarised Over Grouped Genomic Intervals'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biocgenerics
r-biocparallel
r-biostrings
r-chipseq
r-genomeinfodb
r-genomicalignments
r-genomicranges
r-ggplot2
r-iranges
r-preprocesscore
r-reshape2
r-rsamtools
r-rtracklayer
r-s4vectors
r-summarizedexperiment
)
optdepends=(
r-biocstyle
r-knitr
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('e7dfb71ff4b397dfa8da9d0e94ce01ab84413b8b446d758d60f47de77c2c297d')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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