blob: 7ee686f133919c388d5615ebd530676d9871e49e (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
|
# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
# Contributor: Guoyi Zhang <guoyizhang at malacology dot net>
# Contributor: Robert Greener <me@r0bert.dev>
# Contributor: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com
_pkgname=spam
_pkgver=2.11-0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="SPArse Matrix"
arch=(x86_64)
url="https://cran.r-project.org/package=$_pkgname"
license=('LGPL-2.0-only OR BSD-3-Clause')
depends=(
blas
lapack
r-dotcall64
r-rcpp
)
makedepends=(
gcc-fortran
)
checkdepends=(
r-testthat
)
optdepends=(
r-fields
r-knitr
r-r.rsp
r-rmarkdown
r-spam64
r-testthat
r-truncdist
)
source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('daf8e9195dd34a2f0922a4b607575dde')
b2sums=('116e9991c563de6893c514041108817bec0ecd15c03ab67fb95360f120692e75deace4da90611f355485ed0e5988ab0039e63a94a246123995db92862d7ba2de')
prepare() {
# skip tests that require r-fields
sed -i "/require('fields')/i skip_if_not_installed('fields')" \
"$_pkgname/tests/testthat/test-rmvnorm.R"
}
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
check() {
cd "$_pkgname/tests"
R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
install -d "$pkgdir/usr/share/licenses/$pkgname"
ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
}
|