blob: 4ce01d7644b687535c1f3bee34b161328915080f (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=spiky
_pkgver=1.12.0
pkgname=r-${_pkgname,,}
pkgver=1.12.0
pkgrel=1
pkgdesc='Spike-in calibration for cell-free MeDIP'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-bamlss
r-biostrings
r-blandaltmanleh
r-bsgenome
r-genomeinfodb
r-genomicalignments
r-genomicranges
r-ggplot2
r-iranges
r-rsamtools
r-s4vectors
r-scales
)
optdepends=(
r-biocmanager
r-bsgenome.hsapiens.ucsc.hg38.masked
r-bsgenome.mmusculus.ucsc.mm10.masked
r-covr
r-devtools
r-knitr
r-markdown
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('9805932ac71b4682483d54210e411ae4732cbf37e4c305675457b804fdb4b2cd')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|