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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=surfaltr
_pkgver=1.8.0
pkgname=r-${_pkgname,,}
pkgver=1.8.0
pkgrel=1
pkgdesc='Rapid Comparison of Surface Protein Isoform Membrane Topologies Through surfaltr'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
  r
  r-biomart
  r-biostrings
  r-dplyr
  r-ggplot2
  r-httr
  r-msa
  r-protr
  r-readr
  r-seqinr
  r-stringr
  r-testthat
  r-xml2
)
optdepends=(
  r-devtools
  r-kableextra
  r-knitr
  r-rmarkdown
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('9a2023bea6dfc7fed9b8338d5b3e5afbd4386516fd7a714c674b85e9d0469acc')

build() {
  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}

package() {
  install -dm0755 "${pkgdir}/usr/lib/R/library"
  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
  install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et: