PKGBUILD


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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=swfdr
_pkgver=1.30.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Estimation of the science-wise false discovery rate and the false discovery rate conditional on covariates"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-or-later')
depends=(
  r
)
optdepends=(
  r-biocstyle
  r-dplyr
  r-ggplot2
  r-knitr
  r-qvalue
  r-reshape2
  r-rmarkdown
  r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('29d7cd565b5a558e9a6af0da0fa84e18')
b2sums=('5afa9b7eda0c02dbc5bb20f6b2d69682b770e72fbe767a8c21eb29bdf9f0872e6ef174c929d3f866fe8f7fd3daf673bdc33d45f1fe0c67ec3e068a4972be850d')

build() {
  mkdir build
  R CMD INSTALL -l build "$_pkgname"
}

package() {
  install -d "$pkgdir/usr/lib/R/library"
  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}