PKGBUILD


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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=swfdr
_pkgver=1.36.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Estimation of the science-wise false discovery rate and the false discovery rate conditional on covariates"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-or-later')
depends=(
  r
)
optdepends=(
  r-biocstyle
  r-dplyr
  r-ggplot2
  r-knitr
  r-qvalue
  r-reshape2
  r-rmarkdown
  r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('8650ba83d14511bc8b636d272b8f9fca')
b2sums=('39fd0d31ceb8236d832ee6e1784c4b1d286279db71f6a96cf850bf0854a15a8ecc6332dd9858d2c4edc19531a0a8607921458c3aa794d8807e92f47b7e68a971')

build() {
  mkdir build
  R CMD INSTALL -l build "$_pkgname"
}

package() {
  install -d "$pkgdir/usr/lib/R/library"
  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}