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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=TADCompare
_pkgver=1.16.0
pkgname=r-${_pkgname,,}
pkgver=1.16.0
pkgrel=1
pkgdesc='TADCompare: Identification and characterization of differential TADs'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-cowplot
r-dplyr
r-ggplot2
r-ggpubr
r-hiccompare
r-magrittr
r-primme
r-rcolorbrewer
r-reshape2
r-tidyr
)
optdepends=(
r-biocstyle
r-covr
r-knitr
r-microbenchmark
r-pheatmap
r-rgreat
r-rmarkdown
r-spectraltad
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('c58a7044b88866b3e15b1b7723def617b966621a22affab086af79be120478eb')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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