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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=TFBSTools
_pkgver=1.42.0
pkgname=r-${_pkgname,,}
pkgver=1.42.0
pkgrel=1
pkgdesc='Software Package for Transcription Factor Binding Site (TFBS) Analysis'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biobase
r-biocgenerics
r-biocparallel
r-biostrings
r-bsgenome
r-catools
r-cner
r-dbi
r-dirichletmultinomial
r-genomeinfodb
r-genomicranges
r-gtools
r-iranges
r-rsqlite
r-rtracklayer
r-s4vectors
r-seqlogo
r-tfmpvalue
r-xml
r-xvector
)
optdepends=(
r-biocstyle
r-jaspar2014
r-jaspar2016
r-jaspar2018
r-knitr
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('505bc906a725f0093ce833f06a29ef317cb2818e737aea725ba984d3ebd3b52e')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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