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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=tidybulk
_pkgver=1.14.3
pkgname=r-${_pkgname,,}
pkgver=1.14.3
pkgrel=1
pkgdesc='Brings transcriptomics to the tidyverse'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-crayon
r-dplyr
r-genomicranges
r-lifecycle
r-magrittr
r-preprocesscore
r-purrr
r-readr
r-rlang
r-s4vectors
r-scales
r-stringi
r-stringr
r-summarizedexperiment
r-tibble
r-tidyr
r-tidyselect
r-ttservice
)
optdepends=(
r-annotationdbi
r-betareg
r-biocmanager
r-biocstyle
r-boot
r-broom
r-clusterprofiler
r-covr
r-deseq2
r-devtools
r-e1071
r-edger
r-egsea
r-functional
r-ggally
r-ggplot2
r-ggrepel
r-glmmseq
r-here
r-igraph
r-iranges
r-kernsmooth
r-knitr
r-limma
r-lme4
r-markdown
r-mass
r-matrixstats
r-msigdbr
r-org.hs.eg.db
r-org.mm.eg.db
r-pasilla
r-pbapply
r-pbmcapply
r-qpdf
r-rsubread
r-rtsne
r-seurat
r-survival
r-survminer
r-sva
r-testthat
r-tidyheatmap
r-tidysummarizedexperiment
r-uwot
r-vctrs
r-widyr
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('d29378f88a36325ec2510dd8b44c6255736d377e8fade277cf3c82d3b7e9ec36')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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