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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=TitanCNA
_pkgver=1.42.0
pkgname=r-${_pkgname,,}
pkgver=1.42.0
pkgrel=1
pkgdesc='Subclonal copy number and LOH prediction from whole genome sequencing of tumours'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biocgenerics
r-data.table
r-dplyr
r-foreach
r-genomeinfodb
r-genomicranges
r-iranges
r-variantannotation
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('a06b7701555020db2a818170a341245dda954c1dc431e5463ec7bc032cde30a2')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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