blob: 037895dc055dfc406e7a41263ed8cadf14c6e7dc (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=topGO
_pkgver=2.54.0
pkgname=r-${_pkgname,,}
pkgver=2.54.0
pkgrel=1
pkgdesc='Enrichment Analysis for Gene Ontology'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('LGPL')
depends=(
r
r-annotationdbi
r-biobase
r-biocgenerics
r-dbi
r-go.db
r-graph
r-matrixstats
r-sparsem
)
optdepends=(
r-all
r-genefilter
r-globaltest
r-hgu133a.db
r-hgu95av2.db
r-multtest
r-rgraphviz
r-xtable
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('dd2617670ff9aeae2a114bb8c1bd70aa816aae4ed4faf23e6a88ff1942f7f6eb')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|