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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=TRONCO
_pkgver=2.38.0
pkgname=r-${_pkgname,,}
pkgver=2.38.0
pkgrel=1
pkgdesc='TRONCO, an R package for TRanslational ONCOlogy'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-bnlearn
r-circlize
r-doparallel
r-foreach
r-gridextra
r-gtable
r-gtools
r-igraph
r-iterators
r-r.matlab
r-rcolorbrewer
r-rgraphviz
r-scales
r-xtable
)
optdepends=(
r-biocgenerics
r-biocstyle
r-knitr
r-magick
r-rwikipathways
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('2b10d602333d4f161ad33e28998f359fb13ab551cb4b28ff93887cbc6de3b0e2')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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