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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=Ularcirc
_pkgver=1.22.0
pkgname=r-${_pkgname,,}
pkgver=1.22.0
pkgrel=1
pkgdesc='Shiny app for canonical and back splicing analysis (i.e. circular and mRNA analysis)'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('custom')
depends=(
r
r-annotationdbi
r-annotationhub
r-biocgenerics
r-biostrings
r-bsgenome
r-data.table
r-dt
r-genomeinfodb
r-genomeinfodbdata
r-genomicalignments
r-genomicfeatures
r-genomicranges
r-ggplot2
r-ggrepel
r-gsubfn
r-mirbase.db
r-moments
r-organism.dplyr
r-plotgardener
r-r.utils
r-s4vectors
r-shiny
r-shinydashboard
r-shinyfiles
r-shinyjs
r-yaml
)
optdepends=(
r-biocstyle
r-bsgenome.hsapiens.ucsc.hg38
r-httpuv
r-knitr
r-org.hs.eg.db
r-rmarkdown
r-txdb.hsapiens.ucsc.hg38.knowngene
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('97ecc618d4dcdca631b44bca6e4d2d1ab7ff08f4b5c2e1304b3bb5371edff363')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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