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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=velociraptor
_pkgver=1.14.3
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=2
pkgdesc="Toolkit for Single-Cell Velocity"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('MIT')
depends=(
r-basilisk
r-biocgenerics
r-biocparallel
r-biocsingular
r-delayedarray
r-reticulate
r-s4vectors
r-scuttle
r-singlecellexperiment
r-summarizedexperiment
r-zellkonverter
)
optdepends=(
r-biocstyle
r-cowplot
r-ggally
r-ggplot2
r-knitr
r-metr
r-patchwork
r-pkgdown
r-rmarkdown
r-rtsne
r-scater
r-scran
r-scrnaseq
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('8e3b3b1cacc7dc4445453e90fb38046d')
b2sums=('cae671507759c21c2f88572eddbc581be8950090b153854c2c93dde5a84c98a980b16090666a0eed557008e4003c8eae5dabd41aea9baac284c29bf1978ef541')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
install -d "$pkgdir/usr/share/licenses/$pkgname"
ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
}
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