blob: e2dd9bb715a19191f976b25e5d334c03ee928900 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=XtraSNPlocs.Hsapiens.dbSNP144.GRCh37
_pkgver=0.99.12
pkgname=r-${_pkgname,,}
pkgver=0.99.12
pkgrel=4
pkgdesc='Extra SNP locations for Homo sapiens (dbSNP Build 144)'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
r
r-biocgenerics
r-bsgenome
r-genomeinfodb
r-genomicranges
r-iranges
r-s4vectors
)
optdepends=(
r-biostrings
r-bsgenome.hsapiens.ucsc.hg19
r-snplocs.hsapiens.dbsnp144.grch37
)
source=("https://bioconductor.org/packages/release/data/annotation/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('cb3d78d07a7fc00aee25b48728a6a568d72e8dca9e9f7a48abb35589b71b024d')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|