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--- Make.charm 2020-08-05 20:51:20.000000000 +0300
+++ Make.charm 2020-08-10 12:23:57.005349008 +0300
@@ -1,6 +1,6 @@
# Set CHARMBASE to the top level charm directory.
# The config script will override this setting if there is a directory
# called charm-6.10.2 or charm in the NAMD base directory.
-CHARMBASE = /Projects/namd2/charm-6.10.2
+CHARMBASE = ./charm-6.10.2
--- Makefile 2020-08-05 20:51:20.000000000 +0300
+++ Makefile 2020-08-10 12:23:24.245704240 +0300
@@ -660,11 +660,11 @@
.SECONDARY:
# prevent gmake from deleting intermediate files
$(INCDIR)/%.decl.h $(INCDIR)/%.def.h: $(MKINCDIR) $(SRCDIR)/%.ci
- cpp -E -P $(CIPPFLAGS) $(SRCDIR)/$*.ci > $(INCDIR)/$*.ci
+ cpp-9 -E -P $(CIPPFLAGS) $(SRCDIR)/$*.ci > $(INCDIR)/$*.ci
$(CHARMXI) $(INCDIR)/$*.ci
$(RM) $(INCDIR)/$*.ci
$(MOVE) $*.def.h $(INCDIR)
$(MOVE) $*.decl.h $(INCDIR)
--- arch/Linux-x86_64.tcl 2020-08-05 20:51:20.000000000 +0300
+++ arch/Linux-x86_64.tcl 2020-08-10 12:26:37.080503378 +0300
@@ -1,8 +1,8 @@
#TCLDIR=/Projects/namd2/tcl/tcl8.5.9-linux-x86_64
-TCLDIR=/Projects/namd2/tcl/tcl8.5.9-linux-x86_64-threaded
+TCLDIR=/usr
TCLINCL=-I$(TCLDIR)/include
#TCLLIB=-L$(TCLDIR)/lib -ltcl8.5 -ldl
-TCLLIB=-L$(TCLDIR)/lib -ltcl8.5 -ldl -lpthread
+TCLLIB=-L$(TCLDIR)/lib -ltcl8.6 -ldl -lpthread
TCLFLAGS=-DNAMD_TCL
TCL=$(TCLINCL) $(TCLFLAGS)
--- arch/Linux-x86_64.fftw3 2020-08-05 20:51:20.000000000 +0300
+++ arch/Linux-x86_64.fftw3 2020-08-10 12:25:54.367543846 +0300
@@ -1,7 +1,7 @@
-FFTDIR=$(HOME)/fftw3
+FFTDIR=/usr
FFTINCL=-I$(FFTDIR)/include
FFTLIB=-L$(FFTDIR)/lib -lfftw3f
FFTFLAGS=-DNAMD_FFTW -DNAMD_FFTW_3
FFT=$(FFTINCL) $(FFTFLAGS)
--- arch/Linux-x86_64-g++.arch 2020-08-05 20:51:20.000000000 +0300
+++ arch/Linux-x86_64-g++.arch 2020-08-10 12:24:41.554894580 +0300
@@ -1,8 +1,8 @@
NAMD_ARCH = Linux-x86_64
CHARMARCH = multicore-linux-x86_64
CXX = g++ -m64 -std=c++0x
-CXXOPTS = -O3 -fexpensive-optimizations -ffast-math
+CXXOPTS = -O3 -fexpensive-optimizations -ffast-math -fPIC
CC = gcc -m64
-COPTS = -O3 -fexpensive-optimizations -ffast-math
+COPTS = -O3 -fexpensive-optimizations -ffast-math -fPIC
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