12 packages found. Page 1 of 1.

Name Version Votes Popularity? Description Maintainer Last Updated
tigrfam 15.0-1 0 0.00 TIGRFAMs is a resource consisting of curated multiple sequence alignments, Hidden Markov Models (HMMs) for protein sequence classification, and associated information designed to support automated annotation of (mostly prokaryotic) proteins. anadon 2018-04-02 17:56 (UTC)
superfamily 1.75-1 0 0.00 anadon 2018-04-09 19:46 (UTC)
pirsf 80.00-1 0 0.00 The Protein Information Resource (PIR) is an integrated public bioinformatics resource to support genomic, proteomic and systems biology research and scientific studies. anadon 2018-04-02 14:39 (UTC)
pftools 2.3-3 0 0.00 Contains all the software necessary to build protein and DNA generalized profiles and use them to scan and align sequences, and search databases. anadon 2018-04-09 19:44 (UTC)
pfam 31.0-1 0 0.00 The Pfam database is a large collection of protein families, each represented by multiple sequence alignments and hidden Markov models (HMMs). anadon 2018-04-02 16:31 (UTC)
panther 13.1-2 0 0.00 The PANTHER (Protein ANalysis THrough Evolutionary Relationships) Classification System was designed to classify proteins (and their genes) in order to facilitate high-throughput analysis. anadon 2018-04-06 16:07 (UTC)
ncoils 2.2.1-1 0 0.00 Rob Russell's attempt to make a COILS program anadon 2018-04-04 21:11 (UTC)
hmmer3-2 3-1 0 0.00 Profile hidden Markov models (HMMs) for database searching using consensus sequences containing the version 2 and 3 implementations. anadon 2018-03-01 21:22 (UTC)
hamap 2018.march.28-2 0 0.00 High-quality Automated and Manual Annotation of Proteins. anadon 2018-04-09 19:36 (UTC)
fingerprintscan 3.5.96-2 1 0.00 Search against FingerPRINTScan with a protein query sequence to identify the closest matching PRINTS sequence motif fingerprints in a protein sequence. anadon 2018-04-09 18:32 (UTC)
cdd 2018.april.2-1 0 0.00 The Conserved Domain Database is a resource for the annotation of functional units in proteins. Its collection of domain models includes a set curated by NCBI, which utilizes 3D structure to provide insights into sequence/structure/function relationships. anadon 2018-04-04 20:26 (UTC)
cath-tools-git v0.16.2.r20.g82fb9ac7-2 0 0.00 Protein structure comparison tools such as SSAP and SNAP. anadon 2018-04-09 18:25 (UTC)

12 packages found. Page 1 of 1.