Arch Linux User Repository

@dvogel @jnvandermeer @hottea

Build is working for me with only VTK 6 installed. The headers for VTK 6 are located in /opt/vtk6/include/vtk/. This is the path that I have specified in the externallibs.mk file that I have included in the package. My current thinking is that my .mk files weren't getting copied over for some people, so I have modified the PKGBUILD to hopefully remedy this.

Please let me know if you still get errors and what they are. Thanks.

@jnvandermeer Yeah, I think it relates to a VTK versioning issue. If you look at the fsl/config/linux_64-gcc4.8/externallibs.mk, you could see:

VTKDIR_INC = /home/fs0/cowboy/var/caper_linux_64-gcc4.4/VTK7/include/vtk-7.0
VTKDIR_LIB = /home/fs0/cowboy/var/caper_linux_64-gcc4.4/VTK7/lib
VTKSUFFIX = -7.0

It might suggest that fsl needs vtk 7, so I installed vtk 7 from Arch Linux Archive, and then built fsl. It works great. Maybe one could upload a PKGBUILD for package vtk7?

For me the build hangs with a to my eyes rather arcane "undefined reference to `vtkDataArrayTemplate" error. It looks like a VTK versioning issue, but I haven't spent a lot of time on it yet.

Regarding the space issue mentioned before - yaourt in the initial settings uses /tmp, and that mayb possibly be within memory. To deal with compiling FSL you'd have to make sure that yaourt uses a directory on your harddrive (and that there's enough space).

@MonsieurWave, my guess would be that you're running out of disk space or don't have permission to write to the build directory.

Hey Fishburn, Thanks for your work! can't get the package to build tough, it is always failing with "Write failed" errors on numerous files resulting in :

bsdtar: Error exit delayed from previous errors. ==> ERROR: Failed to extract fsl-5.0.10-feeds.tar.gz Aborting... ==> ERROR: Makepkg was unable to build fsl.

Any idea on how to fix this?

Hey Fishburn, thanks for the package. I had issues building the package, however found fixes: - rebuilt newmat with -fPIC in CCFLAGS (solves linking issues, suggested in build.log) - changed include directories in externallibs.mk to vtk8 since vtk headers were not found with vtk6 (even though the latter is installed).

For now I only tested bet with this build.

I updated the checksums, bumped the pkgver (since I don't know what changed since the checksums changed), and got it building again.

@rafaqzsu
@AKSoo
@jnvandermeer
Would appreciate if you could verify its working on your end.

Still broken

==> Validating source files with sha1sums...
fsl-5.0.10-sources.tar.gz ... FAILED
fsl-5.0.10-feeds.tar.gz ... FAILED
systemvars.mk ... Passed
externallibs.mk ... Passed
fsl_exec.patch ... Passed
==> ERROR: One or more files did not pass the validity check!

The tar.gz's from FMRIB fail the sha1sum validation.

The build fails as well. I believe 'fftw' and 'boost' (for the headers) should be included as dependencies.

Some entries in 'externallibs.mk' has header and library directories swapped.

Updated to 5.0.10 and passes all FEEDS build tests