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Package Details: fsleyes 1.8.2-1
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| Git Clone URL: | https://aur.archlinux.org/fsleyes.git (read-only, click to copy) |
|---|---|
| Package Base: | fsleyes |
| Description: | FSLeyes is the FSL image viewer |
| Upstream URL: | https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FSLeyes |
| Licenses: | Apache |
| Submitter: | tobac |
| Maintainer: | tobac |
| Last Packager: | tobac |
| Votes: | 5 |
| Popularity: | 0.000000 |
| First Submitted: | 2017-10-11 11:10 (UTC) |
| Last Updated: | 2023-08-26 13:21 (UTC) |
Dependencies (36)
- fsleyes-props
- fsleyes-widgets
- fslpy
- python (python36, python32, python37, python39, python38, python310, python312)
- python-certifi (python-certifi-system-store)
- python-dill
- python-file-tree
- python-jinja
- python-matplotlib (python-matplotlib-git)
- python-nibabel
- python-numpy (python-numpy1.22, python-numpy-flame, python-numpy-mkl-bin, python-numpy-git, python-numpy-openblas, python-numpy-mkl)
- python-opengl
- python-opengl-accelerate
- python-parse
- python-pillow (python-pillow-git, python-pillow-simd)
- python-pyparsing
- python-pytest-timeout
- python-pytest-xdist
- python-scipy (python-scipy-mkl-bin, python-scipy-git, python-scipy-mkl)
- python-setuptools
- python-six
- python-sphinx (python-sphinx-git, python-sphinx71)
- python-twine (twine)
- python-wheel
- python-wxpython (python-wxpython-git)
- python-xarray
- python-build (make)
- python-installer (python-installer-git) (make)
- python-setuptools (make)
- python-wheel (make)
- fsl (optional) – Enable loading standard images and advanced features (highly recommended)
- jupyter-notebook (optional)
- python-indexed-gzip (optional) – Fast random access of gzipped image files
- python-rtree (optional)
- python-trimesh (optional)
- python-wxnatpy (optional) – Enable loading overlay from XNAT
Latest Comments
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jnvandermeer commented on 2023-03-06 11:20 (UTC)
One of the dependencies is python-dataclasses and this may not work.
When I try to install with pacaur python-dataclasses, it fails with error message: AttributeError: module 'typing' has no attribute '_ClassVar'. Did you mean: 'ClassVar'?
From what I could find, this has something to do with python version being >=3.8.
It gets stuck in the same error when I try to make fsleyes.
keiichiiownsu12 commented on 2022-10-04 22:37 (UTC) (edited on 2022-10-04 22:37 (UTC) by keiichiiownsu12)
Minor suggested patch to
fsleyes.desktop, to allow opening multiple files from file browser...tobac commented on 2022-04-03 09:28 (UTC)
Thanks for bringing this to my attention and apologies for reacting late, I had actually fixed this a few weeks ago and forgot to do "git push".
javierbg commented on 2022-03-10 11:58 (UTC)
A fresh install gives the following error on startup associated to the
pyparsingmodule version:The
python-pyparsingpackage was recently updated to version 3.0 as of 2022-02-14.I tried running the following in the system Python interpreter:
But no error was thrown here.
Adding the following line to the PKGBUILD before install fixes it:
FSLeyes is running without problems now.
By the way, the jinja dependency has been changed from
==2.*to>=2.*, so the existing workaround now does nothing and doesn't appear to be necessary.tobac commented on 2021-05-13 13:51 (UTC)
Added an ugly workaround. The few use cases I tested seemed to work fine. YMMV.
keiichiiownsu12 commented on 2021-05-12 23:35 (UTC)
Recent jinja update breaks fsleyes,
(truncated) pkg_resources.DistributionNotFound: The 'jinja2==2.*' distribution was not found and is required by fsleyestobac commented on 2021-05-04 19:33 (UTC)
This has to do with wxPython being outdated in Arch's repository. Installing wxPython with pip is a workaround until an up-to-date version gets packaged.
keiichiiownsu12 commented on 2021-05-04 17:52 (UTC)
Apologies for flurry of bug reports...
In the "Overlay list" panel, the "link", "save", and toggle-visibility buttons are not being displayed, nor are images shown in the list.
Loading one image gives the following traceback:
Loading a second image gives this traceback
Not sure if this is an upstream issue or not.
tobac commented on 2021-05-04 12:46 (UTC)
Fixed in fsleyes*; thanks.
keiichiiownsu12 commented on 2021-05-03 23:31 (UTC) (edited on 2021-05-03 23:41 (UTC) by keiichiiownsu12)
Source URL, https://git.fmrib.ox.ac.uk/fsl/fsleyes/fsleyes/repository/archive.tar.gz?ref=${pkgver}, redirects towards a login page. This URL, https://git.fmrib.ox.ac.uk/fsl/fsleyes/fsleyes/-/archive/${pkgver}/${pkgname}-${pkgver}.tar.gz, allows the tar.gz file to be downloaded.
A similar issue appears to be affecting the fslpy package as well...
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