I am not sure why but packages that depends on python-scipy refuses to install when using python-scipy-mkl until I explicitly change their dependency to use python-scipy-mkl. As far as I can tell, no error occurs when using python-scipy-mkl for those packages.
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Package Details: python-scipy-mkl 1.14.1-1
Package Actions
| Git Clone URL: | https://aur.archlinux.org/python-scipy-mkl.git (read-only, click to copy) |
|---|---|
| Package Base: | python-scipy-mkl |
| Description: | SciPy is open-source software for mathematics, science, and engineering. |
| Upstream URL: | http://www.scipy.org/ |
| Licenses: | BSD |
| Conflicts: | python-scipy |
| Provides: | python-scipy |
| Submitter: | bred |
| Maintainer: | petronny (AutoUpdateBot) |
| Last Packager: | AutoUpdateBot |
| Votes: | 26 |
| Popularity: | 0.000000 |
| First Submitted: | 2012-09-06 19:34 (UTC) |
| Last Updated: | 2024-08-21 08:06 (UTC) |
Dependencies (13)
- intel-oneapi-mkl (intel-oneapi-hpckitAUR, intel-oneapi-basekit)
- python-numpy (python-numpy-flameAUR, python-numpy-mkl-binAUR, python-numpy-gitAUR, python-numpy1AUR, python-numpy-mklAUR, python-numpy-mkl-tbbAUR)
- python-pooch
- cython (cython-gitAUR, cython0AUR) (make)
- gcc-fortran (gcc-fortran-gitAUR, gcc11-fortranAUR, gcc-fortran-snapshotAUR) (make)
- meson-python (make)
- procps-ng (procps-ng-gitAUR, busybox-coreutilsAUR) (make)
- pybind11 (pybind11-gitAUR) (make)
- python-build (make)
- python-installer (python-installer-gitAUR) (make)
- python-pythran (python-pythran-gitAUR) (make)
- python-pytest (check)
- python-pillow (python-pillow-gitAUR) (optional) – for image saving module
Required by (865)
- advene (requires python-scipy)
- ambertools (requires python-scipy)
- apsynsim (requires python-scipy) (make)
- ardupilot-copter-sitl (requires python-scipy)
- asammdf-git (requires python-scipy) (optional)
- audio-offset-finder-git (requires python-scipy)
- basicanalysis (requires python-scipy)
- caffe (requires python-scipy) (optional)
- caffe-cmake-git (requires python-scipy)
- caffe-cuda (requires python-scipy) (optional)
- caffe-cuda-git (requires python-scipy) (optional)
- caffe-git (requires python-scipy) (optional)
- caffe-ssd (requires python-scipy) (optional)
- casadi (requires python-scipy)
- casadi-git (requires python-scipy) (optional)
- ceph (requires python-scipy) (make)
- ceph-base (requires python-scipy) (make)
- ceph-bin (requires python-scipy)
- ceph-cephadm (requires python-scipy) (make)
- ceph-cephfs (requires python-scipy) (make)
- Show 845 more...
Sources (1)
4rozenwolves commented on 2023-12-26 03:09 (UTC)
kbipinkumar commented on 2023-08-20 08:55 (UTC)
any way of getting rid of following errors by namcap?
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/integrate/_lsoda.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/integrate/_odepack.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/integrate/_quadpack.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/integrate/_test_odeint_banded.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/integrate/_vode.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/interpolate/dfitpack.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/io/_test_fortran.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/linalg/_fblas.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/linalg/_flapack.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/linalg/_flinalg.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/linalg/_interpolative.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/linalg/cython_blas.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/linalg/cython_lapack.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/odr/__odrpack.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/optimize/_lbfgsb.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/optimize/_trlib/_trlib.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/sparse/linalg/_dsolve/_superlu.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/sparse/linalg/_eigen/arpack/_arpack.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/sparse/linalg/_isolve/_iterative.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/sparse/linalg/_propack/_cpropack.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/sparse/linalg/_propack/_dpropack.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/sparse/linalg/_propack/_spropack.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/sparse/linalg/_propack/_zpropack.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/spatial/_qhull.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/special/_ellip_harm_2.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/special/_ufuncs.cpython-311-x86_64-linux-gnu.so')
python-scipy-mkl E: Insecure RUNPATH '/opt/intel/oneapi/mkl/latest/lib/intel64' in file ('usr/lib/python3.11/site-packages/scipy/special/cython_special.cpython-311-x86_64-linux-gnu.so')
4rozenwolves commented on 2022-04-08 12:15 (UTC)
I made an updated python-numpy-mkl and python-scipy-mkl that uses intel-oneapi-mkl.
Be sure to install the updated oneapi packages from https://github.com/huyz-git/intel-oneapi-aur since the current intel-oneapi-mkl cannot be installed with packages from AUR.
MarsSeed commented on 2022-02-22 23:22 (UTC)
I have triggered this package to become orphaned, so a new volunteer can adopt it and update it.
petronny commented on 2021-04-24 12:02 (UTC)
Well, I know this package is out-of-date.
This package need icc to build. But all oneapi packages are missing in archlinux. So I can't build it right now.
Luckily, there is an official repository containing all oneapi packages on ubuntu. And we can directly convert the *.deb packages to archlinux packages.
However, I don't have that much of free time right now. If anyone can help, please start migrating the ubuntu packages to AUR.
petronny commented on 2020-01-22 11:28 (UTC) (edited on 2020-01-22 11:28 (UTC) by petronny)
@RunAndTumble Wait. I mis-understood your previous comment.
Do you mean why I'm using gcc8's headers to build this package?
Maybe they are needed for the old versions. And I haven't tested the current version with the latest headers.
I'll test it and do something about the headers ASAP.
iyanmv commented on 2020-01-07 14:32 (UTC)
I get the following error when trying to use this package:
/usr/lib/python3.8/site-packages/scipy/integrate/vode.cpython-38-x86_64-linux-gnu.so: invalid ELF header
And tons of errors when trying to run the tests with
python
import scipy
scipy.test()
Am I doing something wrong? Compilation seems to work. I also have installed (and used without any issues) the package python-numpy-mkl.
RunAndTumble commented on 2019-11-25 11:35 (UTC)
@petronny Could you please elaborate a bit? I didn't compare the tests for gcc8 and gcc9 but I don't think there should be a difference.
petronny commented on 2019-11-25 08:37 (UTC)
@RunAndTumble I just want to make sure it's fully optimized by mkl.
RunAndTumble commented on 2019-11-18 05:33 (UTC)
Why do you specify the version of gcc? It works nicely with the system one.
Pinned Comments
petronny commented on 2019-06-26 08:47 (UTC)
Prebuilt binaries of this package can be found in arch4edu.