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Package Details: hdf4 4.2.15-1
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Git Clone URL: | https://aur.archlinux.org/hdf4.git (read-only, click to copy) |
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Package Base: | hdf4 |
Description: | General purpose library and file format for storing scientific data (version including the Java Native Interfaces - JNI) |
Upstream URL: | https://portal.hdfgroup.org/display/support/HDF+4.2.15 |
Licenses: | custom |
Conflicts: | hdf4-java |
Provides: | hdf4-java |
Replaces: | hdf4-java |
Submitter: | djscholl |
Maintainer: | XavierCLL |
Last Packager: | XavierCLL |
Votes: | 13 |
Popularity: | 0.000000 |
First Submitted: | 2006-09-25 12:30 (UTC) |
Last Updated: | 2020-04-25 23:10 (UTC) |
Dependencies (5)
- libaec
- libjpeg-turbo (libjpeg-turbo-minimal-git, mozjpeg-git, mozjpeg, libjpeg-turbo-git)
- libtirpc (libtirpc-minimal-git)
- zlib (zlib-static, zlib-git, zlib-ng, zlib-ng-compat-git)
- java-environment (java-gcj-compat, zulu-10-bin, jdk6, jdk12-openj9-bin, zulu-12-bin, jdk12, jdk13-openj9-bin, jdk9-openj9-bin, jdk10, jdk11-openjdk-dcevm, jdk10-openj9-bin, jdk14-openj9-bin, jdk7, zulu-14-bin, amazon-corretto-15, jdk11-openjdk-dcevm-conflicts-fixed, zulu-embedded-jdk8, sapmachine-jdk-bin, amazon-corretto-16, jdk8-graalvm-bin, jdk16-graalvm-bin, jdk8-openjdk-shenandoah, zulu-16-bin, jdk11-graalvm-ee-bin, jdk16-adoptopenjdk, jdk11-openj9-bin, jdk11-microsoft-openjdk, jdk16-microsoft-openjdk, jdk-openj9, jdk11-msopenjdk-bin, jdk18-beta-temurin, jdk8-arm, jdk17-jetbrains, liberica-jdk-11-bin, liberica-jdk-11-lite-bin, liberica-jre-11-bin, jdk11-jetbrains-imfix, java-openjdk-loom-ea-bin, jdk8-dragonwell-bin, jdk17-dragonwell-bin, jdk8-openj9-bin, jdk7-j9-bin, jdk7r1-j9-bin, jdk8-j9-bin, jdk11-j9-bin, jdk-jetbrains, jdk11-jbr-xdg, jdk-jbr-xdg, jdk11, jdk18-openj9-bin, jdk-android-studio, jdk12-openjdk, jdk15-openjdk, jdk16-openjdk, jdk13-openjdk, jdk14-openjdk, zulu-embedded-jdk11, jdk-bcl, jdk-openjdk-xdg, jdk17-jetbrains-imfix, liberica-jre-8-full-bin, zulu-embedded-jdk, amazon-corretto-18, zulu-18-bin, zulu-17-bin, zulu-11-bin, zulu-8-bin, zulu-15-bin, zulu-13-bin, jdk-lts, jdk, liberica-jdk-11-full-bin, liberica-jdk-17-full-bin, liberica-jdk-full-bin, liberica-jre-11-full-bin, jdk11-graalvm-bin, jdk17-graalvm-bin, jdk11-temurin, jdk-temurin, jdk17-temurin, amazon-corretto-8, jdk17-graalvm-ee-bin, java-openjdk-bin, bishengjdk-17, jdk8-adoptopenjdk, jdk11-dragonwell-bin, jdk-arm, jdk-microsoft-openjdk, jdk8, liberica-jdk-8-full-bin, jdk-openj9-bin, java-openjdk-ea-bin, jre-jetbrains, amazon-corretto-11, amazon-corretto-17, jdk-openjdk, jdk11-openjdk, jdk17-openjdk, jdk8-openjdk) (make)
Required by (20)
- gdal-hdf4
- gnudatalanguage
- gnudatalanguage-gdlkernel
- grads
- h4h5tools
- harp
- hdf-eos-common
- hdf-eos2
- hdfview (make)
- hdfview (optional)
- hdfview-git
- libnexus (optional)
- ncl
- perl-pdl (make)
- perl-pdl (optional)
- python-pyhdf
- python-pyhdf (make)
- python2-pyhdf
- python2-pyhdf (make)
- stc-coda
Latest Comments
RonnyD commented on 2020-01-27 16:58 (UTC)
I have problems compiling the package. Perhaps it is necessary to update the java dependencies?
steinbuch commented on 2019-10-29 13:15 (UTC)
I'm trying to compile HDF4 in another context. Despite patching configure.ac to find libtirpc the ./configure fails:
-- Looking for xdr_int - not found -- Looking for xdr_int in /usr/lib/libnsl.so - not found -- HDF4 XDR Library will be built -- Configuring incomplete, errors occurred!
respectively
Could not locate xdr symbols in libc or libnsl.
Has anybody occurred this error before?
Luk0r commented on 2019-03-22 09:26 (UTC) (edited on 2019-03-22 09:36 (UTC) by Luk0r)
I get the following error:
checking whether the C compiler works... no configure: error: in `/tmp/yaourt-tmp-schmidan/aur-hdf4/src/build': configure: error: C compiler cannot create executables See `config.log' for more details
see https://pastebin.com/HwT6D8aEand config.log says: https://pastebin.com/n7xQuG9g
meriops commented on 2019-02-10 13:55 (UTC)
@eleftg Thank you for your suggestion. It turns out that my JAVA_OPTIONS were incorrectly specified in my shell startup file, and for some reason, they were being copied to the Makefiles during building, which was messing up. So now the package compiled fine, although I still had to use --disable-dependency-tracking.
eleftg commented on 2019-02-09 21:12 (UTC) (edited on 2019-02-09 21:13 (UTC) by eleftg)
@meriops No idea why this could be happening but can you try changing line 33 of the PKGBUILD to:
and then post back whether it worked?
meriops commented on 2019-02-07 09:34 (UTC) (edited on 2019-02-07 09:38 (UTC) by meriops)
Hi, This package is not compiling for me... I get :
config.status: error: in `/home/ol/progs/builds/hdf4/src/build': config.status: error: Something went wrong bootstrapping makefile fragments for automatic dependency tracking. Try re-running configure with the '--disable-dependency-tracking' option
When I do as suggested, I then get :
Makefile:319: *** missing separator. Stop.
Any hint as what I am doing wrong?
eleftg commented on 2019-01-26 21:47 (UTC) (edited on 2019-01-26 21:48 (UTC) by eleftg)
Well noticed Arcturus. Thank you!
Indeed, ever since the package switched from static to shared libs, the fortran option needed to be disabled due to a configuration error
I now created a separate
hdf4-static
(https://aur.archlinux.org/packages/hdf4-static) package that offers fortran.Arcturus commented on 2019-01-26 17:28 (UTC)
The description says this is the "full version including the FORTRAN and the Java Native Interfaces - JNI", yet the configure flag
--disable-fortran
is used in the PGKBUILD.Should the description (or PKGBUILD) be updated, or am I missing something?
XavierCLL commented on 2018-11-05 22:53 (UTC)
Perfect thanks!
eleftg commented on 2018-11-05 22:49 (UTC)
No problem.
I've also added you as a co-maintainer, so that you can directly apply any future modifications.
XavierCLL commented on 2018-11-05 20:35 (UTC)
Hi @eleftg again, I forgot to add the load library path in /etc/ld.so.conf.d/ when I converted the hdf4 to share lib, please update (4.2.14-4): https://pastebin.com/G9HnWfL4
eleftg commented on 2018-11-05 06:49 (UTC)
Done. Thanks XavierCLL
XavierCLL commented on 2018-11-05 05:00 (UTC)
Hi @eleftg, I implemented some changes: 1) added "--disable-netcdf" for use the native netcdf, because (without that) using the netcdf that have the hdf4 bring some problems and conflicts (read more https://goo.gl/ZVZDtj) 2) I made some changes for enabling share library (better than static). PKBGUILD here: https://pastebin.com/BheBm34w
XavierCLL commented on 2018-08-21 15:17 (UTC)
Hi @eleftg, please use this adjust for linked with szlib: https://pastebin.com/iaat9jP9
eleftg commented on 2018-07-03 23:46 (UTC)
Adopted, upgraded to 4.2.14 and patched configure.ac to fix the xdr error
eleftg commented on 2018-05-31 19:30 (UTC)
Thank you very much for your contribution petronny!
I updated the package to include your patch.
petronny commented on 2018-05-20 06:24 (UTC) (edited on 2018-05-20 06:24 (UTC) by petronny)
I fixed it with
It's a bug with java-enviroment>8. And this patch works with java-enviroment=8. Please fix it.
petronny commented on 2018-05-17 15:14 (UTC)
I get
No idea how to fix it...
eleftg commented on 2018-05-16 21:14 (UTC) (edited on 2018-05-16 21:15 (UTC) by eleftg)
Fixed. It was a configuration issue. The hdf4 autoconf infrastructure is quite dated and on top of that the rpc headers recently passed from glibc to libtirpc, so changes were needed to the configuration script.
See also:
https://bugs.archlinux.org/task/58414
https://lists.opensuse.org/opensuse-factory/2018-03/msg00097.html
nisok commented on 2018-05-16 11:09 (UTC) (edited on 2018-05-16 11:09 (UTC) by nisok)
This package does not compile. It fails will error
--enable-hdf4-xdr
does not support 64bitgreyltc commented on 2018-05-08 09:53 (UTC) (edited on 2018-05-08 09:55 (UTC) by greyltc)
I'm having trouble building this package.
Problems with missing:
hdf4-java/src/hdf-4.2.13/bin/missing: Unknown '--is-lightweight'
Problems with FORTRAN:
gfortran: error: unrecognized command line option '-V'
But then this is what kills it:
configure: error: --enable-hdf4-xdr is not supported for 64 bit mode.
Build log here --> log.txt
Also, I have:
Does it matter what java I'm using?
bunder commented on 2018-05-06 06:31 (UTC)
Doesn't build on x86_64 with following error:
configure: error: --enable-hdf4-xdr is not supported for 64 bit mode.
rprospero commented on 2017-09-11 13:43 (UTC)
Polly commented on 2015-02-19 10:52 (UTC)
djscholl commented on 2014-02-23 23:29 (UTC)
djscholl commented on 2013-02-27 12:09 (UTC)
djscholl commented on 2012-09-13 09:08 (UTC)
pezz commented on 2012-09-11 07:37 (UTC)
djscholl commented on 2012-04-25 23:42 (UTC)
giniu commented on 2012-03-13 11:16 (UTC)
commented on 2012-03-13 10:05 (UTC)
djscholl commented on 2012-03-09 10:41 (UTC)
nullas commented on 2012-03-06 09:44 (UTC)
djscholl commented on 2011-07-20 09:58 (UTC)
giniu commented on 2011-07-19 07:16 (UTC)