Package Details: mafft 7.304-1

Git Clone URL: https://aur.archlinux.org/mafft.git (read-only)
Package Base: mafft
Description: Multiple alignment program for amino acid or nucleotide sequences
Upstream URL: http://mafft.cbrc.jp/alignment/software
Licenses: custom
Submitter: None
Maintainer: boenki
Last Packager: boenki
Votes: 12
Popularity: 0.480583
First Submitted: 2009-03-29 17:15
Last Updated: 2016-08-13 09:41

Latest Comments

jduc commented on 2016-05-23 14:59

There is a new version: 7.294
pkgver=7.294
md5sums=('0008c2230e17e76f7fb62aa562371f40')

Also, the compilation for the extensions failed in Linux 4.5.4-1 with the following error: http://pastebin.com/raw/x24r6dKH. Commenting the part about the extension in the PKGBUILD solved the problem for me as I don't need any extensions.

boenki commented on 2014-05-16 09:01

The RNA structural alignment feature is incompatible with gcc 4.8.x and above Even if compilation succeeds, the result can be incorrect.
I just uploaded 7.149-2 which is compiled by clang and works correctly, as far as I can see.

boenki commented on 2014-03-27 08:25

updated

dstruck commented on 2014-03-26 09:04

There is a new version of mafft: 7.147
---
pkgver=7.147
md5sums=('6bfd1d3c4f953e69774c6bd135436326')

Zorino commented on 2013-06-08 21:59

Yes the good md5sum is :

zorino@/~ $ md5sum mafft-7.045-with-extensions-src.tgz
969ca3a114b7b85d4cca02e97bc64c00 mafft-7.045-with-extensions-src.tgz

Thanks.

Stunts commented on 2013-06-08 21:09

Please correct the md5sums in the package. =-)
Thanks!

boenki commented on 2012-10-17 12:51

updated :)

Anonymous comment on 2012-10-17 12:21

Saw now that there is even a newer version on the source page http://mafft.cbrc.jp/alignment/software/source.html . But it is not yet announced on the changelog page http://mafft.cbrc.jp/alignment/software/changelog.html .
---
pkgver=6.950
md5sums=('c74b02985ca507daee6c8007bee3f465')

Anonymous comment on 2012-10-17 09:42

new version is out:

pkgver=6.940
md5sums=('bc5539ed8c8b95b56d7b45d00680a3e1')

Stunts commented on 2011-07-20 21:39

You're welcome!
[rant]
Regarding the double man page - *in my opinion*, keeping the system neat is the users' job, not the program developer's. If one tries to anticipates all the crazy things users do and prepare the software for all that... where will it end? But he's upstream, so he's the boss. =-)
[/rant]

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