Package Details: sra-tools-bin 3.1.1-1

Git Clone URL: https://aur.archlinux.org/sra-tools-bin.git (read-only, click to copy)
Package Base: sra-tools-bin
Description: The SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives
Upstream URL: http://www.ncbi.nlm.nih.gov/books/NBK158900/
Licenses: custom
Groups: sequence_analysis
Provides: sra-tools, sratoolkit
Submitter: ragouel
Maintainer: ChangqingW
Last Packager: ChangqingW
Votes: 5
Popularity: 0.081962
First Submitted: 2020-04-15 17:43 (UTC)
Last Updated: 2024-08-02 06:08 (UTC)

Dependencies (4)

Required by (0)

Sources (2)

Latest Comments

ragouel commented on 2020-04-15 17:44 (UTC)

Also, this is a binary package so it will be merged into sra-tools-bin

ragouel commented on 2020-04-15 17:38 (UTC)

Normally directories don't belong in /usr/bin. However both Ubuntu and CentOS .tgz files have the ncbi directory inside /bin. Not wanting to break any binary, I left it there. If anyone knows if it's safe to move to /usr/share, let me know.

sauliusl commented on 2020-02-28 12:55 (UTC)

@pinjontall feel free to adopt the package, I have just disowned it !

pinjontall commented on 2020-02-27 06:49 (UTC)

Hey sauliusl, do you still want to maintain this package? I have a PKGBUILD that works for the latest version as of this writing (v2.10.4). I just updated the pkgver, pkgrel, updated to the latest sha256 sums and it looks like it works fine.

lmk!

clintval commented on 2018-01-06 02:44 (UTC) (edited on 2018-01-06 02:44 (UTC) by clintval)

I agree this package should have the suffix -bin.

It would be great if you added the following to your PKGBUILD:

provides=('sratoolkit')

conflicts=('sra-tools' 'sratoolkit')

balwierz commented on 2015-08-05 15:39 (UTC)

This package should be called sratoolkit-bin, because you are using precompiled binaries.

sauliusl commented on 2015-02-19 16:41 (UTC)

PKGBUILD for 2.4.4 http://pastebin.com/fYb8Vn54 I also changed the package() directives to use more install commands and less cp/mv Tested only fastq-dump